BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039E06SP1|AL430713
(922 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1770 1789 0.0
>3x_Contig1770
Length = 29267
Score = 1789 bits (902), Expect = 0.0
Identities = 920/924 (99%), Gaps = 2/924 (0%)
Strand = Plus / Minus
Query: 1 atctgaacttttctw-gatta-tgattatttgtttgaaatatagtggtgagtgaatacgt 58
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 16526 atctgaacttttctttgattactgattatttgtttgaaatatagtggtgagtgaatacgg 16467
Query: 59 attcatactaggattatttgattactagtcgttctttcatatacagtttgatttaaagaa 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16466 attcatactaggattatttgattactagtcgttctttcatatacagtttgatttaaagaa 16407
Query: 119 cgcaactgagatagacaagtgggacattattctacatagaaaagaagataaatgtgtggt 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16406 cgcaactgagatagacaagtgggacattattctacatagaaaagaagataaatgtgtggt 16347
Query: 179 gtgttaggtatttgtttggcggatcaaacagctgctgttgctccagaattattcgacgga 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16346 gtgttaggtatttgtttggcggatcaaacagctgctgttgctccagaattattcgacgga 16287
Query: 239 tgtttatttttacaacatagaggtcaagatgctgctggtatctcgacttgtgggcaacgt 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16286 tgtttatttttacaacatagaggtcaagatgctgctggtatctcgacttgtgggcaacgt 16227
Query: 299 ggtagattataccaatgcaagggtaacggtatggctcgtgacgttttcactcaacaaaga 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16226 ggtagattataccaatgcaagggtaacggtatggctcgtgacgttttcactcaacaaaga 16167
Query: 359 atggccggattagttggttccatgggtattgctcacttgcgttatccaactgctggttcc 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16166 atggccggattagttggttccatgggtattgctcacttgcgttatccaactgctggttcc 16107
Query: 419 agtgctaactctgaagctcaacctttctatgtcaacagtccatatgggatctgtatgggc 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16106 agtgctaactctgaagctcaacctttctatgtcaacagtccatatgggatctgtatgggc 16047
Query: 479 cataacggtaatttggttaacactcaggctatacaacgttacatggatgaagatgtacat 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16046 cataacggtaatttggttaacactcaggctatacaacgttacatggatgaagatgtacat 15987
Query: 539 agacatatcaacacggatagtgactccgagttgttgttgaacatcttcgctgctgagttg 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15986 agacatatcaacacggatagtgactccgagttgttgttgaacatcttcgctgctgagttg 15927
Query: 599 gagaaatacaacaagtacagagttaacaacgacgatatcttccatgctttagaaggtgta 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15926 gagaaatacaacaagtacagagttaacaacgacgatatcttccatgctttagaaggtgta 15867
Query: 659 tatcgtttgtgtcgtggtgggtatgcctgcgttggtatggttgctggttttgccatgatc 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15866 tatcgtttgtgtcgtggtgggtatgcctgcgttggtatggttgctggttttgccatgatc 15807
Query: 719 gggttcagggatcctaacggtatcagacctttgttattcggtaccagaaccaacgctgat 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15806 gggttcagggatcctaacggtatcagacctttgttattcggtaccagaaccaacgctgat 15747
Query: 779 ggtactaaggactatatgctagcgtcagagagtgtggtattaaaggcccacaatttcaac 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15746 ggtactaaggactatatgctagcgtcagagagtgtggtattaaaggcccacaatttcaac 15687
Query: 839 gatttccgtgatttgaagcctggtgaagccgtcatcgtgccaaaggattgctcaaagagt 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15686 gatttccgtgatttgaagcctggtgaagccgtcatcgtgccaaaggattgctcaaagagt 15627
Query: 899 gaaccagagtttaggcaggtggtt 922
||||||||||||||||||||||||
Sbjct: 15626 gaaccagagtttaggcaggtggtt 15603
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5931
Number of Sequences: 1807
Number of extensions: 5931
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 922
length of database: 10,358,551
effective HSP length: 16
effective length of query: 906
effective length of database: 10,329,639
effective search space: 9358652934
effective search space used: 9358652934
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)